基于价值评估的黄山市生境质量时空演变特征分析

评价与分析特定区域的生境质量及其时空变化对其生态安全格局构建、可持续发展意义重大。本文以典型旅游城市黄山市为研究区，综合生态系统服务价值评价模型、基于NPP与NDVI的生境质量指数评价、InVEST生境质量评价模型、空间分析等模型与方法对黄山市1987-2017年生境质量进行研究。结果表明：（1）1987-2007年，黄山市生境质量总值持续下降，2017出现回升，但生境受到的威胁仍增加，生境最优区为北部太平湖区域，生境质量低值主要分布在各县区主城区；生境质量栅格等级变化以4等级转变为3等级为主。（2）1987-2017年，黄山市105个乡镇（街道）中有84个乡镇（街道）生境质量有所下降，主要分布在东部区域；北部环太平湖区域的乡镇为生境质量"高高"型聚集区及热点区域，屯溪区、徽州区南部、歙县、休宁县主城区的各镇为生境质量"低低"型聚集区及冷点区域。（3）黄山市城市发展对生境质量影响较大，大体上距离城市中心点越近的圈层，生境质量越差；距离黄山市旅游中心点10-20、30-40、40-50 km的3个圈层形成生境质量低值点，为旅游与城区互助发展的结果；黄山市旅游与生境质量空间分布相关性较强，旅游设施、景区核密度越高，低等级生境质量占比越高。     

Multiomic Metabolic Enrichment Network Analysis Reveals Metabolite–Protein Physical Interaction Subnetworks Altered in Cancer

Metabolism is recognized as an important driver of cancer progression and other complex diseases, but global metabolite profiling remains a challenge. Protein expression profiling is often a poor proxy since existing pathway enrichment models provide an incomplete mapping between the proteome and metabolism. To overcome these gaps, we introduce multiomic metabolic enrichment network analysis (MOMENTA), an integrative multiomic data analysis framework for more accurately deducing metabolic pathway changes from proteomics data alone in a gene set analysis context by leveraging protein interaction networks to extend annotated metabolic models. We apply MOMENTA to proteomic data from diverse cancer cell lines and human tumors to demonstrate its utility at revealing variation in metabolic pathway activity across cancer types, which we verify using independent metabolomics measurements. The novel metabolic networks we uncover in breast cancer and other tumors are linked to clinical outcomes, underscoring the pathophysiological relevance of the findings.     

Intrauterine growth retarded piglet as a model for humans – Studies on the perinatal development of the gut structure and function

The overall acceptance of pig models for human biomedical studies is steadily growing. Results of rodent studies are usually confirmed in pigs before extrapolating them to humans. This applies particularly to gastrointestinal and metabolism research due to similarities between pig and human physiology. In this context, intrauterine growth retarded (IUGR) pig neonate can be regarded as a good model for the better understanding of the IUGR syndrome in humans. In pigs, the induction of IUGR syndrome may include maternal diet intervention, dexamethasone treatment or temporary reduction of blood supply. However, in pigs, like in humans, circa 8% of neonates develop IUGR syndrome spontaneously. Studies on the pig model have shown changes in gut structure, namely a reduced thickness of mucosa and muscle layers, and delayed kinetic of disappearance of vacuolated enterocytes were found in IUGR individuals in comparison with healthy ones. Functional changes include reduced dynamic of gut mucosa rebuilding, decreased activities of main brush border enzymes, and changes in the expression of proteins important for carbohydrate, amino acids, lipid, mineral and vitamin metabolism. Moreover, profiles of intestinal hormones are different in IUGR and non-IUGR piglets. It is suggested that supplementation of the mothers during the gestation and/or the IUGR offspring after birth can help in restoring the development of the gastrointestinal tract. The pig provides presumably the optimal animal model for humans to study gastrointestinal tract structure and function development in IUGR syndrome.     

Food quality for Eudiaptomus gracilis: the importance of particular highly unsaturated fatty acids

1. Development times and survival of nauplii and copepodites of the freshwater calanoid Eudiaptomus gracilis were measured on comparably sized Cryptomonas sp. and two strains of Chlamydomonas reinhardii under food saturated conditions (1 mg C L−1) to investigate the nutritional quality of these algae.
2.  Cryptomonas sp. supported complete ontogenesis of nauplii to adults, whereas both strains of C. reinhardii were inadequate for the development of nauplii and copepodites and resulted in high mortality. The nutritional deficiency of both strains of C. reinhardii was compensated for by Cryptomonas sp. when the latter constituted ≥50% of dietary carbon. Pulses of Cryptomonas sp. had a similar compensatory effect.
3. In comparison to Cryptomonas sp., both strains of C. reinhardii were deficient in the three highly unsaturated fatty acids (HUFAs) stearidonic, eicosapentaenoic and docosahexaenoic acid. We manipulated the fatty acid content of C. reinhardii by externally adding these three HUFAs to the alga so that the fatty acid profile resembled that of Cryptomonas sp. This supplementation did not improve food quality, however, indicating that the nutritional deficiency of both strains of C. reinhardii for the ontogenesis of E. gracilis is not due to a lack of these three HUFAs.     

Interaction between the light quality and flowering time pathways in Arabidopsis

Flowering in Arabidopsis is accelerated by a reduced ratio of red light to far-red light (R/FR), which indicates the proximity of competitive vegetation. By exploiting the natural genetic variation in flowering time responses to low R/FR, we obtained further insight into the complex pathways that fine-tune the transition to flowering in Arabidopsis. The Bla-6 ecotype does not flower significantly earlier in response to low R/FR, but is still able to display other features of shade avoidance, suggesting branching of low R/FR signalling. Here we show that the muted flowering response of Bla-6 is due to high levels of the floral repressor FLOWERING LOCUS C (FLC), conferred by a combination of functional FLC and FRIGIDA ( FRI ) alleles with a 'weak' FY allele. The Bla-6 FY allele encodes a protein with a corrupted WW binding domain, and we provide evidence that this locus plays a key role in the natural variation in light quality-induced flowering in Arabidopsis. In Bla-6, FLC blocks promotion to flowering by reduced R/FR by inhibiting expression of the floral integrator FLOWERING LOCUS T ( FT ) in a dose-dependent manner. Reduction of FLC removes this obstruction, and Bla6 plants then exhibit strong induction of FT and flower early in response to a low R/FR signal. This paper illustrates the intricate interaction of environmental signals and genetic factors to regulate flowering in Arabidopsis.     

Evaluation of nutrients and related environmental factors for wolfberry (Lycium barbarum) fruits grown in the different areas of China

The wolfberry (Lycium barbarumL.) fruit has been used in traditional Chinese medicine and food, but fruits grown in various geographic areas are significantly different in quality and content of functional components. In this study, we tested the internal nutritional ingredients and related environmental factors using forty-two wolfberry fruits collected from seven wolfberry producing regions in China (Yinchuan and Zhongning in Ningxia, Jingyuan in Gansu, Nuomuhong Farm in Qinghai,Hangjinhouqi and Wulateqianqi in Inner Mongolia, and Jinghe in Xinjiang). The nutritional ingredients of the forty-two wolfberry fruits are dependent on the environment. Correlation analysis revealed that the amount of nutrients was highly related to each other. Based on the analysis ofratio of total sugar to betaine (sugar-alkali ratio), we have successfully established quality standards for the wolfberry based on the levels of betaine and sugar. The standards were as follows: high betaine low sugar (sugar-alkali ratio≤15.1), high betaine medium sugar (15<sugar-alkali ratio≤60), medium betaine medium sugar (60<sugar-alkali ratio≤121), medium betaine high sugar (121<sugar-alkali ratio≤165), and low betaine high sugar (sugar-alkali ratio>165). Zhongning of Ningxia is the geo-authentic producing region of the wolfberry, whereby the wolfberries are rich in main pharmacological ingredients Lycium barbarum polysaccharide (LBP) and three trace elements (iron, manganese and selenium) and medium sugar-alkali ratio. In addition, the correlation analysis showed that both the altitude and average temperature difference between day and night had positive effects on the wolfberry flavonoids content but the annual sunshine duration negatively affected the betaine contents of the wolfberry fruit.     

Models of annual cycles in lentic water bodies

A discussion of mathematical modelling of water quality, including a summary of the parameters considered, a comparison of the two major model types (stochastic and deterministic) and a review of the validation process, is presented. A water quality model currently being developed is discussed and a list of ecological models already developed is given.     

The role of protein quality control in mitochondrial protein homeostasis under oxidative stress

Mitochondria contribute significantly to the cellular production of ROS. The deleterious effects of increased ROS levels have been implicated in a wide variety of pathological reactions. Apart from a direct detoxification of ROS molecules, protein quality control mechanisms are thought to protect protein functions in the presence of elevated ROS levels. The reactivities of molecular chaperones and proteases remove damaged polypeptides, maintaining enzyme activities, thereby contributing to cellular survival both under normal and stress conditions. We characterized the impact of oxidative stress on mitochondrial protein homeostasis by performing a proteomic analysis of isolated yeast mitochondria, determining the changes in protein abundance after ROS treatments. We identified a set of mitochondrial proteins as substrates of ROS‐dependent proteolysis. Enzymes containing oxidation‐sensitive prosthetic groups like iron/sulfur clusters represented major targets of stress‐dependent degradation. We found that several proteins involved in ROS detoxification were also affected. We identified the ATP‐dependent protease Pim1/LON as a major factor in the degradation of ROS‐modified soluble polypeptides localized in the matrix compartment. As Pim1/LON expression was induced significantly under ROS treatment, we propose that this protease system performs a crucial protective function under oxidative stress conditions.